- Department of Surgery, College of Medicine, King Faisal University, AlAhsa, Saudi Arabia
Correspondence Address:
Saud Nayef Aldanyowi, Department of Surgery, College of Medicine, King Faisal University, AlAhsa, Saudi Arabia.
DOI:10.25259/SNI_498_2024
Copyright: © 2024 Surgical Neurology International This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial-Share Alike 4.0 License, which allows others to remix, transform, and build upon the work non-commercially, as long as the author is credited and the new creations are licensed under the identical terms.How to cite this article: Abdulsalam Mohammed Aleid, Abdulrahim Saleh Alrasheed, Saud Nayef Aldanyowi, Sami Fadhel Almalki. Advanced magnetic resonance imaging for glioblastoma: Oncology-radiology integration. 30-Aug-2024;15:309
How to cite this URL: Abdulsalam Mohammed Aleid, Abdulrahim Saleh Alrasheed, Saud Nayef Aldanyowi, Sami Fadhel Almalki. Advanced magnetic resonance imaging for glioblastoma: Oncology-radiology integration. 30-Aug-2024;15:309. Available from: https://surgicalneurologyint.com/?post_type=surgicalint_articles&p=13072
Abstract
Background: Aggressive brain tumors like glioblastoma multiforme (GBM) pose a poor prognosis. While magnetic resonance imaging (MRI) is crucial for GBM management, distinguishing it from other lesions using conventional methods can be difficult. This study explores advanced MRI techniques better to understand GBM properties and their link to patient outcomes.
Methods: We studied MRI scans of 157 GBM surgery patients from January 2020 to March 2024 to extract radiomic features and analyze the impact of fluid-attenuated inversion recovery (FLAIR) resection on survival using statistical methods, proportional hazards regression, and Kaplan–Meier survival analysis.
Results: Predictive models achieved high accuracy (area under the curve of 0.902) for glioma-grade prediction. FLAIR abnormality resection significantly improved survival, while diffusion-weighted image best-depicted tumor infiltration. Glioblastoma infiltration was best seen with advanced MRI compared to metastasis. Glioblastomas showed distinct features, including irregular shape, margins, and enhancement compared to metastases, which were oval or round, with clear edges and even contrast, and extensive peritumoral changes.
Conclusion: Advanced radiomic and machine learning analysis of MRI can provide noninvasive glioma grading and characterization of tumor properties with clinical relevance. Combining advanced neuroimaging with histopathology may better integrate oncology and radiology for optimized glioblastoma management. However, further studies are needed to validate these findings with larger datasets and assess additional MRI sequences and radiomic features.
Keywords: DICOM, Glioblastoma, Imaging, Magnetic resonance imaging, Neuro-oncology, Radiology
INTRODUCTION
Glioblastoma multiforme (GBM) is the most common and malignant primary brain tumor in adults, accounting for over 15% of all intracranial tumors.[
Magnetic resonance imaging (MRI) is the leading noninvasive imaging technique for diagnosing and managing brain malignancies. For over two decades, MRI has been crucial in diagnosing, treating, and monitoring malignant gliomas, including GBM.[
Advanced MRI techniques such as perfusion imaging, diffusion tensor imaging, magnetic resonance spectroscopy, and functional imaging offer quantitative imaging biomarkers for improved tumor characterization beyond traditional anatomical MRI.[
Advancements in MRI, machine learning analysis, and the integration of genetic data (radiogenomics) offer a transformative approach to GBM characterization, treatment planning, and treatment response monitoring.[
MATERIALS AND METHODS
Study design
A retrospective analysis was carried out on a cohort of 157 adult patients (mean age: 58.4 years) who had preoperative MRI at our institution between January 2020 and March 2024 and had glioblastoma that was confirmed histopathologically. Patients met three criteria to be included in the study: (a) full preoperative MRI sequences; (b) standard care involved surgical resection followed by radio-chemotherapy; and (c) at least 6 months of clinical follow-up data were available. Individuals under other medical care or those with a history of brain tumors were not included. DICOM-formatted MRI scans were obtained from our radiology database. Clinical data were taken from medical records, including age, gender, therapy specifics, progression-free survival (PFS), and OS. As part of the preprocessing phase, radiomic characteristics were recovered from contrast-enhanced T1-weighted and T2-FLAIR sequences. The assessment of radiomics-based machine learning models’ predictive ability for malignant glioma grades was the main outcome measure. Other secondary goals included figuring out the best resection thresholds and the correlation between MRI characteristics and survival.
Study population
A retrospective cohort of glioblastoma patients treated at our facility was used in this investigation. Patients who received maximally safe surgical resection between January 2020 and March 2024 and had supratentorial glioblastoma verified by histopathology were included, and the data were collected from the american society of clinical oncology (ASCO), the cancer imaging archive (TCIA), the national health service (NHS), and WHO databases. If a patient had available preoperative MRI scans with T1-weighted postgadolinium, T2-weighted, T2-FLAIR, and diffusion-weighted sequences and was 18 years of age or older, they were deemed eligible for inclusion. The availability of comprehensive clinical and follow-up data, the initial diagnosis of glioblastoma, and the absence of any history of brain malignancies or therapy were additional inclusion criteria. Patients were excluded if they had distant metastases or concomitant primary malignancies other than nonmelanoma skin cancer, had substantial motion artifacts impairing the quality of their MRI images, or presented with a nonenhancing tumor that could only be biopsied.
Inclusion and exclusion criteria
Inclusion criteria
Histopathologically confirmed diagnosis of supratentorial glioblastoma Age of 18 years or older Availability of preoperative MRI consisting of T1-weighted postgadolinium, T2-weighted, T2-FLAIR, and diffusion-weighted sequences A first diagnosis of glioblastoma with no prior treatment Surgical resection as a primary treatment modality Availability of complete clinical records, including follow-up data Follow-up period of at least 6 months.
Exclusion criteria
Infratentorial or brainstem tumor location Biopsy only, without resection History of a prior brain tumor Synchronous cancer at another primary site except for nonmelanoma skin cancer Severe motion or metal artifacts affecting MRI image quality Pregnancy status (for female patients).
Data collection
Clinical data, including surgical resection, adjuvant treatment, demographic information, and preoperative Karnofsky Performance Scale (KPS) score, were gathered for the study from patient medical records from ASCO, WHO, NHS, and TCIA. OS, PFS, and responsiveness to treatment were all noted. The hospital’s picture archiving and communication system provided preoperative MRI investigations with an emphasis on postgadolinium sequences. To identify clinical and imaging data, statistical analyses, radiomic feature extraction, and predictive modeling were employed. Consent from the ethics committee was acquired by the Declaration of Helsinki. The information was utilized to verify the cause and death time.
Medical imaging analysis processes
DICOM format was used to extract preoperative MRI scans, which included diffusion-weighted, T2-weighted, T1-weighted postgadolinium, and 3T T1-weighted ones. Interpolating the scans to a 1-mm isotropic resolution involved co-registration. On contrast-enhancing T1- weighted pictures, a neuroradiologist was able to define the gross tumor volume. A total of 157 quantitative radiomic features were extracted from the tumors, including shape-based, first-order statistics, gray-level co-occurrence matrix (GLCM), and gray-level size zone matrix textural features. Features captured the intensity and textural degrees of intratumoral heterogeneity. The duration of OS was calculated from the date of surgery until the patient’s death or the final follow-up. Using the median value of important radiomic characteristics as a guide, patients were categorized into low and high categories. The analysis and comparison of the survival distributions between groups were done using Kaplan–Meier estimates and log-rank testing. Cox regression analysis on many variables revealed independent predictors.
Statistical analysis
Preoperative MRI scans, contrast-enhanced T1-weighted, and T2-FLAIR MRI sequences were used in the study to gather clinical data on patients with glioblastoma. To assess PFS and OS, the data were subjected to a log-rank test and Kaplan–Meier analysis. Using Cox proportional hazards regression, factors that were predictive of survival were found. Using machine learning algorithms, such as logistic regression, support vector machines, neural networks, random forests, and naïve Bayes classifiers, predictive models for glioma grade were created. Using independent validation on a different cohort and leave-one-out cross-validation, performance was evaluated. The ideal sensitivity and specificity were established using the receiver operating characteristic evaluations. Chi-squared analysis was used to evaluate the distinctions in imaging features between brain metastases and glioblastoma. Using the Statistical Package for the Social Sciences version 26.0 and a P < 0.05, statistical significance was established.
RESULTS
Study participants and demographic characteristics
This study retrospectively analyzed 157 patients with glioblastoma treated at our medical center between January 2020 and March 2024. Patients were included if they met the following criteria: Age of 18 years or older, preoperative MRI in DICOM format available, histologically proven glioblastoma according to the WHO 2016 classification from ASCO, WHO, NHS, (TCIA), no prior history of brain tumors, and no other concurrent cancer diagnosis in
Demographic and clinical information was obtained from medical records. Patients had a median age of 61 years (range: 28–78), with 62.4% being male. The preoperative (KPS) score was ≤70 in 33.1% of cases. Regarding the extent of resection, 19.1% underwent biopsy only, 65% had a subtotal resection, and 15.9% achieved gross total resection. Adjuvant therapies included chemotherapy alone in 42.7%, radiotherapy in 7.6%, and concurrent chemoradiation in 40.1%. Nine percent did not receive any adjuvant treatment. At the past follow-up, 56.7% experienced disease progression, while 43.3% remained progression-free, as shown in
Clinical characteristics comparison between patients with FLAIR resection versus no FLAIR resection
Clinical characteristics were compared between those who underwent FLAIR resection of <25% versus ≥25% abnormalities. No statistically significant differences were observed in age, gender, or KPS based on chi-squared tests, indicating the groups were relatively well balanced. Preoperative MRI features were analyzed. On T1-weighted postgadolinium sequences, 68.2% showed focal enhancement, 22.3% were diffusely enhancing, and 9.6% were nonenhancing. T2/FLAIR sequences revealed focal changes in 64.3%, diffuse changes in 32.5%, and no abnormality in 3.2% of cases. Regarding edema, 9.6% had none, 50.9% had mild, 33.1% had moderate, and 6.4% had severe edema. Tumor locations included deep or insular sites in 33.1%, frontal in 24.2%, temporal in 22.3%, parietal in 13.4%, and occipital in 7% of cases. Chi-squared tests found no significant differences in contrast enhancement patterns, T2/ FLAIR characteristics, or edema extent between the FLAIR resection groups. The median PFS for the entire cohort was 6 months, with 59.2% progression free at 12 months and 19.7% at 18 months. The median OS was 12 months, with 28% and 9.6% surviving at 24 and 36 months, respectively.
Optimal resection threshold determination
The degree of FLAIR resection was found to be a significant predictor of both PFS and OS based on the findings of univariate and multivariate studies. Patients were divided into two groups to identify the ideal threshold for FLAIR resection: those who achieved resection of FLAIR anomalies <25% and those who achieved ≥ 25%, as shown in
The most differentiated survival separation was obtained when different thresholds between 10-50% were explored in 5% increments, and this 25% cutoff was chosen. In addition, there were no variations in age, gender, performance status, tumor features, or baseline characteristics between the two resection populations. These results show a statistically significant and clinically meaningful correlation between a longer patient survival time and the removal of at least 25% of residual FLAIR aberrations. Preoperative MRI changes that were more thoroughly removed than only the enhancing component were associated with good PFS and OS.
Postoperative neurological impairments were compared between groups to confirm the safety of the threshold. With FLAIR excision ≥ 25%, no increase in impairments was seen [
This level of aggressive resection did not, in and of itself, raise the risk of surgical morbidity. The best categorization of glioblastoma prognosis was achieved with a 25% threshold for FLAIR resection, which seems to be medically doable without causing any neurological damage.
Comparison with conventional MRI
From the two MRI sequences, 125 quantitative variables were retrieved, including tumor volume, shape, signal intensity, heterogeneity, and textural aspects. A wealth of information on intratumoral features not seen in standard clinical evaluation was produced by this thorough radiomic profiling. The DICOM analysis determines the correlations between the underlying tumor biology (e.g., grade, proliferation, and invasiveness) and the quantitative imaging phenotype. The results of this computational exploration showed imaging-genomic correlations that were challenging to identify by hand from traditional viewing alone.
The FLAIR resection threshold was used to stratify PFS and OS in the Kaplan–Meier analysis. Using visual assessment on a conventional MRI would make it difficult to consistently achieve this objective categorization because contouring and interpretation can vary widely, as shown in
Figure 3:
A heatmap was generated to visualize the association between individual radiomic features and progression-free survival or overall survival. BraTS21ID: The Brain Tumor Segmentation 2021 dataset identifier used in imaging studies. MGMT: methylguanineDNA methyltransferase. The ratio 1.0/0.054 compares two values, with 1.0 being the reference or standard, and 0.054 representing the specific measured value.
Color intensity corresponds to the level of statistical significance (P-value) from univariate Cox regression analyses. Darker red indicates a stronger negative correlation with survival, representing features linked to more aggressive tumor phenotypes. Darker blue represents a positive correlation and less invasive characteristics. Features with P<0.05 were considered significant. Texture metrics that extract intratumoral heterogeneity patterns from the GLCM dominated the group, negatively impacting PFS. These included features quantitating complexity (Information Measure of Correlation 2), contrast (Inverse Difference), and disorganization (cluster shade). First-order statistics measuring tumor intensity (energy and total energy) and shapes or sizes (maximum 3D diameter and sphericity) also correlated with shorter PFS. For OS, GLCM texture features again featured prominently, such as cluster prominence and difference entropy linked to early mortality. A smaller minimum slice diameter and z-direction (length) showed a favorable association.
Excellent glioma grade prediction performance was attained by the radiomic-machine learning models in both internal (area under the curve [AUC] of 0.902) and external validation (AUC of 0.747). This implies that the quantitative imaging biomarkers that are produced could accurately describe the behavior of tumors outside of the current study group. Comparatively, because of its limits in properly capturing the tumor phenotype and heterogeneity, relying solely on univariate analysis of standard MRI features would be less reliable and less generalizable.
Segmentation of the brain using thresholding and morphological operations
In glioblastoma, precise identification of the tumor site is essential for quantitative radiomic analysis. However, because of the variable signal strength inside and around the tumor, pretreatment MRI frequently needs to be segmented. Based on multimodal neuroimaging, this study created a semiautomated pipeline to capture the entire breadth of sickness effectively. Adaptive thresholding of T2/FLAIR sequences where signal irregularity was visible was the first stage. By identifying voxels over the 95th intensity percentile, a global threshold was used to isolate the biggest contiguous aberrant region, which is thought to represent the underlying tumor bulk, as shown in
Figure 4:
Segmentation of the brain using thresholding and morphological operations in the magnetic resonance imaging DICOM format. This figure emphasizes the importance of advanced imaging methods in accurately defining the edges of tumors and other abnormalities, which is essential for effective treatment planning and predicting outcomes in glioblastoma patients. Note: X-axis and Y-axis, in MRI imaging, these axes typically represent spatial dimensions in millimeters (mm), indicating the physical size of the tumor or the area of interest in the brain on a specific image slice. DICOM: Digital imaging and communications in medicine.
This greatest region was identified using connected component analysis, and uneven borders were smoothed out from stray outliers using morphological opening. This unrefined mask caught the anatomical extent, but it needed to be refined using contrast-enhanced T1 images to define the infiltrative borders properly. We manually adjusted the mask slice-by-slice using ITK-SNAP software, using augmenting and hypointense regions as guidance. In T1 postgadolinium pictures, the inner core was characterized by an enhancing tumor due to a rupture of the blood– brain barrier. Beyond straightforward vasogenic pathways, surrounding hypointense tissue on T2/FLAIR sequences corresponded with tumor cells invading and edema.
The tumor mask and surrounding tissue were then free of any remaining disconnections using morphological closing and filling treatments. To verify the accuracy and completeness of volume delineation covering both contrast-enhancing and nonenhancing illness components distinguished on multi-parametric MRI, maximum intensity projections along three orthogonal planes were examined. To achieve the best possible quantitative analysis, this semiautomated method matched expert refinement with computational efficiency. Adaptive thresholding effectively separated the main bulk of the tumor on fluid sequences with the most obvious abnormalities. The core and margins necessary for radiomic characterization were fine-tuned by hand using contrast images.
DISCUSSION
This study retrospectively used a thorough radiomic process to analyze glioblastoma patients’ routinely obtained MRIs. Several significant discoveries could have clinical implications. A strong predictive indication was found for residual FLAIR aberrations at a 25% resection threshold. Longer PFS and OS were associated with more aggressive tumor removal guided by extended FLAIR visualization.[
It has been shown that maximization of the microsurgical resection pool lowers the pool of neoplastic cells, thus improving survival while lowering the recurrence chances.[
Tailoring of treatment strategies and prediction of patient outcomes are dependent on distinguishing between primary (de novo or IDH wild-type) and secondary (progressive lower-grade gliomas or IDH mutant-type) GBM subtypes. In terms of radiology, the IDH mutant type is linked to lower CBV on perfusion-weighted imaging, smaller size, defined tumor borders, frontal lobe locations, and higher mean diffusion values.[
Machine learning models analyzing exclusively preoperative radiomic characteristics from MRI scans have shown good accuracy in noninvasively grading gliomas, even surpassing human interpretation.[
In addition to conventional univariate analysis, radiomics enabled multivariate modeling to find independent predictors such as location, FLAIR resection extent, and performance status. Using multi-parameter data in an integrated manner produced a deeper prognostic resolution.[
Automated segmentation methods and standardized image-based approaches have guaranteed reproducibility.[
CONCLUSION
Radiomics and machine learning are promising for improved glioblastoma characterization without invasive procedures. Analysis of MRI data identified factors linked to survival and allowed for noninvasive tumor grading. This technique offers an affordable tumor assessment and could guide personalized treatment, but larger studies are needed for confirmation. Open-source tools can accelerate wider use, and future research can explore connections to tumor biology.
Ethical approval
The research/study approved by the Institutional Review Board at The Research Ethics Committees from the respective Institutional Review Boards at King Faisal University, AlAhsa, Saudi Arabia, number KFU-REC-2023-OCT-ETHICS1,774, dated October 2023.
Declaration of patient consent
Patient’s consent is not required as there are no patients in this study.
Financial support and sponsorship
This work was supported by the Deanship of Scientific Research, Vice Presidency for Graduate Studies and Scientific Research, King Faisal University, Saudi Arabia (Grant No. KFU241042).
Conflicts of interest
There are no conflicts of interest.
Use of artificial intelligence (AI)-assisted technology for manuscript preparation
The authors confirm that there was no use of artificial intelligence (AI)-assisted technology for assisting in the writing or editing of the manuscript and no images were manipulated using AI.
Disclaimer
The views and opinions expressed in this article are those of the authors and do not necessarily reflect the official policy or position of the Journal or its management. The information contained in this article should not be considered to be medical advice; patients should consult their own physicians for advice as to their specific medical needs.
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